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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1498.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1300.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1429
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1725.0
Min RPKM: 230.6
Std RPKM: 217.5
Median RPKM: 568.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1725.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1468.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1358.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1261.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1187.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1167.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1109.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1083.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1032.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1019.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
959.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
952.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
940.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
929.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
922.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
915.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
901.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
894.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
886.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
862.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
841.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
840.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
835.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
833.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
833.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
822.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
797.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
795.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
792.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
791.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
790.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
787.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
784.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
770.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
760.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
754.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
751.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
751.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
741.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
740.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
736.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
736.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
736.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
733.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
729.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
729.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
715.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
715.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
714.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
712.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
711.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
711.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
710.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
708.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
708.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
704.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
693.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
690.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
690.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
681.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
678.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
677.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
676.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
669.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
668.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
668.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
663.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
662.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
657.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
650.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
648.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
645.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
643.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
641.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
635.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
635.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
633.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
632.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
631.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
631.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
630.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
622.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
618.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
616.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
612.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
610.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
608.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
605.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
603.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
600.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
598.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
597.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
596.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
594.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
593.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
587.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
585.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
584.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
583.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
581.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
581.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
580.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
579.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
573.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
572.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
572.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
570.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
565.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
559.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
558.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
558.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
558.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
556.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
548.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
546.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
542.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
536.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
534.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
533.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
532.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
531.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
531.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
530.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
529.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
529.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
526.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
520.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
517.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
517.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
513.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
512.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
512.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
510.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
510.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
502.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
500.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
492.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
492.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
491.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
490.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
490.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
487.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
486.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
479.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
479.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
477.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
476.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
475.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
474.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
471.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
470.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
463.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
463.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
462.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
458.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
454.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
450.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
450.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
448.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
446.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
443.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
442.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
437.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
435.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
428.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
425.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
425.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
421.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
418.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
418.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
417.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
415.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
411.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
410.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
410.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
408.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
405.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
405.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
402.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
402.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
399.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
398.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
397.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
397.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
395.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
392.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
390.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
389.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
389.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
388.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
385.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
384.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
379.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
359.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
358.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
354.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
352.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
342.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
342.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
341.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
340.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
335.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
334.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
334.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
326.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
312.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
312.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
303.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
300.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
282.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
273.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
263.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
235.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
230.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.