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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 123.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 46.2
Min RPKM: 17.3
Std RPKM: 5.4
Median RPKM: 28.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
46.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
45.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
41.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
40.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
40.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
39.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
38.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
37.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
37.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
37.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
36.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
36.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
36.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
36.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
35.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
35.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
34.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
34.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
34.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
33.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
33.5
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
33.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
33.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
33.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
33.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
32.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
32.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
32.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
32.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
32.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
31.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
31.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
31.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
31.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
31.6
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
31.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
31.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
31.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
31.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
31.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
31.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
30.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
30.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
30.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
30.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
30.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
29.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
29.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
29.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
29.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
29.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
29.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
29.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
29.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
28.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
28.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
28.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
28.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
28.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
28.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
28.4
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
28.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
28.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
28.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
28.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
27.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
27.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
27.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
27.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
27.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
27.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
27.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
27.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
27.3
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
27.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
27.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
26.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
26.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
26.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
26.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
26.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
26.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
26.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
26.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
26.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
25.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
25.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
25.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
25.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
25.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
25.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
25.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
25.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
24.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
24.7
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
24.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
24.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
23.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
23.7
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
22.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
22.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
22.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
22.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
21.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
21.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
21.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
21.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
20.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
20.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
20.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
20.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
19.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
19.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
17.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 39.8
Samples: 108
Max RPKM: 65.1
Min RPKM: 16.4
Std RPKM: 9.4
Median RPKM: 40.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
65.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
63.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
60.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
58.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
57.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
55.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
54.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
53.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
53.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
53.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
52.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
50.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
49.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
49.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
49.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
48.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
48.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
48.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
47.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
47.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
47.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
47.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
47.0
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
46.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
46.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
45.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
45.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
45.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
45.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
44.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
44.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
44.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
43.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
43.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
43.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
42.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
42.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
42.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
42.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
42.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
42.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
41.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
41.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
41.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
41.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
40.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
40.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
40.9
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
40.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
40.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
40.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
40.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
40.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
40.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
40.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
40.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
39.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
39.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
39.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
39.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
39.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
39.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
39.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
38.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
38.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
38.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
38.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
38.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
37.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
37.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
37.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
36.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
36.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
36.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
36.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
35.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
35.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
35.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
35.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
35.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
34.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
34.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
34.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
34.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
33.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
33.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
33.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
33.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
31.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
30.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
30.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
30.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
29.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
28.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
27.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
27.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
27.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
27.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
26.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
25.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
25.2
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
24.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
22.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
22.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
19.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
18.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
18.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
16.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.