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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 102.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 66.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 420.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 786.7
Min RPKM: 46.8
Std RPKM: 70.4
Median RPKM: 133.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
786.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
330.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
311.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
306.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
303.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
290.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
286.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
281.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
280.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
280.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
257.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
249.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
248.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
242.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
238.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
235.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
231.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
231.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
228.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
226.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
223.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
221.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
221.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
216.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
211.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
210.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
208.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
207.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
204.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
202.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
201.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
201.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
201.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
200.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
199.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
196.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
193.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
190.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
190.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
189.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
188.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
187.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
187.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
184.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
183.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
181.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
181.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
181.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
181.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
180.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
179.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
176.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
175.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
174.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
174.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
172.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
171.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
170.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
170.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
169.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
169.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
168.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
166.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
166.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
165.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
161.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
161.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
159.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
159.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
159.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
158.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
157.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
157.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
156.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
155.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
151.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
151.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
150.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
149.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
149.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
148.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
148.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
147.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
147.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
146.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
145.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
144.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
143.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
141.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
140.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
140.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
140.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
139.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
139.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
139.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
139.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
138.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
137.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
135.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
135.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
135.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
135.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
134.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
134.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
134.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
134.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
134.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
133.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
132.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
132.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
130.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
130.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
130.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
129.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
128.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
126.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
126.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
126.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
126.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
125.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
125.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
125.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
124.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
123.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
122.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
122.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
121.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
121.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
120.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
119.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
119.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
119.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
119.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
118.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
118.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
118.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
118.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
117.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
116.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
115.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
114.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
114.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
114.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
113.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
113.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
112.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
112.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
112.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
111.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
111.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
111.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
111.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
110.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
109.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
109.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
109.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
109.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
107.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
106.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
106.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
106.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
104.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
103.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
103.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
102.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
102.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
101.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
98.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
98.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
98.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
97.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
96.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
95.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
94.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
94.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
93.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
93.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
93.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
93.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
93.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
92.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
92.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
90.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
90.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
89.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
88.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
84.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
83.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
82.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
82.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
81.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
81.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
81.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
81.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
81.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
79.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
79.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
77.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
75.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
75.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
74.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
74.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
73.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
73.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
69.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
69.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
69.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
68.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
62.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
60.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
58.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
58.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
52.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
46.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.