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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 125.9
Min RPKM: 35.4
Std RPKM: 18.0
Median RPKM: 65.8
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
125.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
120.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
113.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
109.2
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
106.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
101.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
100.4
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
95.2
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
94.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
90.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
90.6
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
89.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
89.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
86.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
86.2
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
85.5
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
81.9
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
81.8
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
80.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
80.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
80.0
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
78.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
78.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
77.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
77.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
76.7
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
75.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
75.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
74.9
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
74.8
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
73.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
73.5
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
72.6
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
72.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
71.9
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
70.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
70.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
69.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
69.3
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
69.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
68.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
68.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
68.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
68.0
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
67.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
66.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
66.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
66.1
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
65.5
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
65.3
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
64.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
64.2
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
62.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
62.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
61.8
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
61.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
60.7
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
60.6
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
60.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
60.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
60.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
60.1
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
59.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
59.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
59.3
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
58.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
58.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
58.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
57.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
56.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
55.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
55.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
55.0
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
54.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
54.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
54.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
53.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
51.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
51.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
50.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
50.0
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
48.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
48.3
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
47.6
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
47.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
47.3
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
45.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
45.8
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
45.7
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
45.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
45.3
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
44.9
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
44.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
41.2
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
41.2
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
35.4
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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