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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 342.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 161.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 236.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 504.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 431.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 501.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 283.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 373.6
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 120.0
Min RPKM: 16.0
Std RPKM: 15.8
Median RPKM: 62.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
120.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
115.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
108.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
96.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
95.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
94.8
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
91.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
89.8
GTEX-S33H-1626-SM-4AD68
30-39 years, male
88.4
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
88.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
86.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
86.6
GTEX-RU72-1426-SM-46MUF
50-59 years, female
86.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
86.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
85.9
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
84.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
84.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
83.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
82.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
80.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
79.6
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
79.2
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
78.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
74.6
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
73.7
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
73.6
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
72.0
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
71.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
70.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
70.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
70.6
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
70.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
70.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
70.1
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
69.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
69.5
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
68.8
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
68.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
68.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
66.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
66.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
66.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
65.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
65.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
65.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
65.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
65.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
65.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
64.7
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
64.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
64.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
64.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
64.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
63.6
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
63.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
63.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
63.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
62.9
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
62.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
62.6
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
62.0
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
61.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
61.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
61.7
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
61.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
61.0
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
60.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
60.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
60.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
60.5
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
60.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
59.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
59.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
59.3
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
59.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
58.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
57.6
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
57.2
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
56.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
56.4
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
56.2
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
56.1
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
56.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
55.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
55.2
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
54.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
53.7
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
53.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
53.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
53.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
53.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
53.3
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
53.0
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
52.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
52.5
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
51.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
51.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
51.6
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
51.6
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
51.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
51.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
50.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
49.9
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
49.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
49.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
49.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
49.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
48.5
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
47.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
46.8
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
46.2
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
45.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
44.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
44.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
42.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
41.7
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
38.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
37.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
16.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
