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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 205.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 18.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 15.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 62.5
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 47.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 148.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 86.7
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 112
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 497.8
Min RPKM: 31.6
Std RPKM: 90.6
Median RPKM: 167.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
497.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
476.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
395.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
374.7
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
348.3
GTEX-RN64-1826-SM-48FDV
50-59 years, male
338.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
337.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
335.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
333.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
310.8
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
309.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
307.9
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
293.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
290.4
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
285.7
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
283.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
280.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
276.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
269.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
265.1
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
256.0
GTEX-YECK-1926-SM-4W21H
60-69 years, male
254.8
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
254.5
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
251.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
247.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
247.2
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
239.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
238.1
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
237.4
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
237.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
234.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
233.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
228.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
224.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
224.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
223.1
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
220.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
219.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
215.0
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
209.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
207.2
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
202.0
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
201.1
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
198.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
197.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
194.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
192.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
191.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
187.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
187.1
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
186.5
GTEX-P78B-1326-SM-3P611
40-49 years, female
183.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
178.1
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
173.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
172.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
171.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
171.0
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
169.0
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
168.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
167.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
166.5
GTEX-REY6-1226-SM-48FDR
60-69 years, male
162.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
162.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
160.7
GTEX-R53T-0326-SM-48FEC
50-59 years, female
160.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
158.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
158.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
156.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
155.9
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
153.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
153.3
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
152.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
147.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
147.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
143.6
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
143.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
143.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
141.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
140.2
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
138.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
136.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
129.9
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
128.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
126.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
124.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
123.3
GTEX-QEL4-1226-SM-447A4
50-59 years, male
122.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
121.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
120.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
119.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
119.2
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
114.8
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
112.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
109.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
108.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
106.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
100.5
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
98.0
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
96.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
96.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
90.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
83.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
74.8
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
72.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
70.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
68.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
67.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
66.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
65.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
65.2
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
64.7
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
60.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
54.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
46.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
45.1
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
42.9
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
38.5
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
38.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
31.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
