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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 168.7
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 199.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 134.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 214.5
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 223.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 161.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 195
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 307.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 345.2
Min RPKM: 18.0
Std RPKM: 55.6
Median RPKM: 111.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
345.2
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
279.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
259.6
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
239.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
231.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
217.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
216.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
210.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
207.9
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
202.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
191.6
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
188.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
185.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
178.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
177.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
174.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
172.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
171.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
167.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
161.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
157.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
156.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
152.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
151.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
149.8
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
149.0
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
146.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
145.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
144.3
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
141.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
139.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
138.9
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
136.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
134.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
134.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
133.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
132.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
132.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
132.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
131.1
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
130.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
129.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
129.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
129.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
127.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
127.2
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
127.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
124.5
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
123.0
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
119.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
119.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
119.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
118.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
114.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
113.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
113.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
112.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
111.8
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
111.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
111.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
109.3
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
106.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
105.6
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
104.6
GTEX-12696-0826-SM-5EGGE
60-69 years, male
101.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
100.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
99.3
GTEX-1399T-0826-SM-5IFES
60-69 years, male
99.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
99.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
95.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
95.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
94.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
94.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
92.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
91.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
90.2
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
90.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
86.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
84.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
84.8
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
84.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
83.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
82.8
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
79.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
76.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
75.9
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
74.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
74.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
74.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
74.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
73.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
71.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
69.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
68.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
67.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
62.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
61.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
61.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
60.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
60.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
60.0
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
60.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
57.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
57.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
54.3
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
53.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
51.9
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
51.9
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
49.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
47.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
47.4
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
47.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
46.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
42.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
41.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
39.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
39.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
28.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
18.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
