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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 224.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 21.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 140.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 363.6
Min RPKM: 4.0
Std RPKM: 69.6
Median RPKM: 69.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
363.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
310.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
307.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
294.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
289.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
270.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
260.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
251.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
247.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
244.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
243.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
242.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
225.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
215.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
211.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
210.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
208.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
205.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
198.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
198.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
196.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
190.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
180.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
179.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
178.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
176.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
173.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
169.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
168.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
164.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
160.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
157.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
156.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
156.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
156.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
155.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
153.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
153.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
150.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
149.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
148.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
148.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
147.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
139.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
138.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
137.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
136.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
123.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
123.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
122.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
121.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
121.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
120.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
120.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
120.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
119.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
118.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
118.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
117.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
112.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
109.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
109.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
106.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
106.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
105.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
103.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
102.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
101.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
101.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
100.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
99.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
98.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
98.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
97.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
96.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
95.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
95.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
94.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
94.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
93.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
90.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
87.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
86.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
86.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
86.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
86.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
84.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
84.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
83.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
83.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
82.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
82.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
82.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
81.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
80.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
80.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
78.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
78.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
78.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
77.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
76.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
75.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
71.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
71.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
70.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
69.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
69.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
68.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
67.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
67.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
66.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
65.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
64.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
64.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
63.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
63.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
62.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
62.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
62.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
62.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
58.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
58.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
57.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
57.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
56.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
56.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
56.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
55.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
55.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
55.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
54.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
54.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
54.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
53.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
53.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
52.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
52.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
52.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
51.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
51.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
50.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
50.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
49.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
48.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
47.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
47.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
45.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
45.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
43.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
43.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
43.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
41.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
41.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
40.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
39.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
39.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
38.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
38.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
37.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
37.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
35.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
34.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
33.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
33.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
33.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
33.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
32.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
31.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
31.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
31.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
31.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
30.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
30.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
29.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
28.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
28.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
28.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
27.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
26.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
25.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
25.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
25.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
24.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
23.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
22.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
22.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
22.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
22.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
20.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
20.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
20.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
20.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
20.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
20.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
19.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
18.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
18.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
18.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
17.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
17.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
16.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
15.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
14.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
14.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
11.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
10.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
10.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
10.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
9.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
8.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
7.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
4.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
4.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
4.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.