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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 883.5
Min RPKM: 264.3
Std RPKM: 104.5
Median RPKM: 429.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
883.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
713.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
639.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
634.6
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
627.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
618.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
615.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
613.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
599.3
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
594.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
594.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
585.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
578.3
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
575.6
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
568.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
567.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
556.6
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
555.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
548.9
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
546.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
543.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
526.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
512.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
508.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
506.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
493.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
486.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
486.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
485.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
485.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
477.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
475.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
470.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
469.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
461.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
453.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
452.9
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
452.0
GTEX-11I78-1926-SM-59878
50-59 years, female
450.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
447.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
446.7
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
445.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
445.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
442.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
438.3
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
437.0
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
432.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
432.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
429.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
428.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
427.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
420.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
417.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
415.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
413.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
413.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
411.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
411.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
410.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
409.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
408.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
407.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
405.6
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
404.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
395.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
392.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
392.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
385.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
383.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
378.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
377.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
372.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
372.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
371.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
370.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
364.3
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
363.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
362.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
362.3
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
362.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
360.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
355.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
351.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
350.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
348.1
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
345.3
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
335.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
330.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
328.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
328.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
311.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
310.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
309.9
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
301.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
292.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
267.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
264.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.