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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 3387.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1402.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2876.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 638.0
Min RPKM: 112.4
Std RPKM: 72.6
Median RPKM: 210.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
638.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
561.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
530.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
458.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
402.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
398.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
386.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
368.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
358.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
353.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
350.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
330.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
329.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
324.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
323.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
322.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
322.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
319.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
316.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
313.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
311.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
306.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
303.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
298.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
292.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
288.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
286.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
286.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
284.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
278.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
278.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
277.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
276.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
275.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
272.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
268.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
265.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
265.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
265.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
265.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
264.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
264.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
263.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
263.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
262.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
262.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
259.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
259.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
257.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
255.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
255.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
254.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
249.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
248.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
247.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
246.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
242.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
240.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
240.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
240.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
240.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
239.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
238.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
238.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
238.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
238.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
237.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
234.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
234.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
233.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
232.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
232.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
231.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
230.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
230.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
229.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
228.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
228.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
227.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
225.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
224.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
222.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
222.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
222.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
221.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
220.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
220.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
220.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
219.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
218.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
218.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
217.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
217.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
217.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
217.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
215.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
215.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
215.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
214.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
213.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
213.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
211.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
211.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
211.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
211.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
210.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
210.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
210.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
208.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
208.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
208.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
207.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
206.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
205.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
204.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
204.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
203.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
203.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
202.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
202.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
202.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
201.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
201.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
201.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
201.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
198.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
197.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
197.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
196.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
195.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
195.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
195.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
193.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
193.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
193.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
190.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
190.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
190.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
189.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
189.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
189.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
189.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
188.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
187.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
186.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
184.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
184.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
183.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
182.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
182.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
181.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
181.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
181.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
180.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
180.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
180.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
179.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
178.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
178.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
178.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
176.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
176.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
175.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
175.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
175.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
174.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
173.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
172.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
171.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
171.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
171.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
169.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
169.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
169.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
169.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
168.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
168.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
167.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
165.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
161.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
160.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
159.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
159.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
157.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
155.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
154.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
153.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
153.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
152.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
152.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
145.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
144.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
144.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
144.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
143.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
142.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
141.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
138.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
138.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
137.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
135.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
135.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
134.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
133.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
132.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
132.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
131.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
129.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
127.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
126.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
123.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
123.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
121.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
112.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.