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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 140.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 5.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 8.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1020.3
Min RPKM: 0.5
Std RPKM: 201.8
Median RPKM: 94.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
1020.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
781.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
772.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
749.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
737.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
711.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
710.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
642.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
631.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
618.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
584.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
566.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
534.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
516.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
514.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
505.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
504.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
494.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
490.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
485.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
478.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
471.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
465.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
465.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
455.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
444.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
443.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
442.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
442.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
432.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
430.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
418.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
414.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
412.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
407.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
397.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
387.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
375.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
357.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
355.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
350.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
347.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
344.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
337.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
327.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
324.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
321.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
319.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
312.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
311.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
309.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
304.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
296.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
293.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
289.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
285.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
276.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
272.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
271.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
269.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
269.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
266.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
264.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
260.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
259.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
258.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
254.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
241.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
233.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
225.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
216.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
213.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
212.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
212.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
206.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
201.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
200.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
193.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
189.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
186.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
179.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
177.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
170.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
162.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
161.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
161.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
153.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
151.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
146.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
140.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
137.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
128.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
126.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
125.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
122.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
121.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
121.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
120.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
107.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
106.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
101.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
98.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
97.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
95.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
95.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
95.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
95.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
94.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
94.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
92.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
87.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
84.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
84.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
80.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
76.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
72.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
70.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
65.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
64.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
60.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
59.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
59.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
56.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
53.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
53.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
52.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
51.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
50.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
48.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
48.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
47.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
46.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
45.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
45.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
43.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
43.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
42.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
40.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
39.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
38.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
38.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
37.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
36.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
32.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
32.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
32.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
30.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
30.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
26.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
26.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
25.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
23.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
21.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
19.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
17.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
16.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
14.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
14.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
13.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
13.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
12.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
12.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
11.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
11.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
11.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
11.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
10.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
10.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
10.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
10.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
9.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
8.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
8.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
8.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
8.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
7.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
6.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
6.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
6.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
5.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
5.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
5.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
5.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
5.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
4.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
4.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
4.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
4.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
4.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
4.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
3.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
3.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
3.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
3.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
3.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
3.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
3.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
2.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
2.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
2.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
2.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
2.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
2.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
2.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
1.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
0.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
0.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
0.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
0.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
0.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.