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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 163.0
Min RPKM: 3.5
Std RPKM: 30.7
Median RPKM: 13.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
163.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
139.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
127.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
114.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
106.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
96.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
92.4
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
71.0
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
60.7
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
58.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
56.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
51.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
50.9
GTEX-S341-1226-SM-4AD5S
40-49 years, female
50.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
47.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
42.0
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
39.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
38.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
37.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
37.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
36.9
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
36.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
35.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
32.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
27.5
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
27.3
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
25.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
24.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
24.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
22.2
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
22.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
21.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
21.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
20.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
19.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
19.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
19.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
18.9
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
17.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
16.6
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
16.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
15.7
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
15.5
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
15.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
15.2
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
14.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
14.4
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
14.2
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
13.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
13.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
13.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
13.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
13.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
13.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
12.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
12.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
12.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
11.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
11.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
11.5
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
11.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
10.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
10.8
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
10.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
10.6
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
10.4
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
10.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
9.7
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
9.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
9.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
9.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
8.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
8.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
8.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
7.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
7.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
7.0
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
6.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
6.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
6.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
6.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
6.2
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
6.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
6.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
5.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
5.9
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
5.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
5.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
4.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
4.8
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
4.6
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
4.5
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
4.3
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
4.0
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
3.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
3.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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