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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1599.2
Min RPKM: 480.1
Std RPKM: 247.8
Median RPKM: 863.3
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
1599.2
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
1538.8
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
1451.3
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
1362.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
1307.5
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
1277.1
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
1203.8
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
1191.1
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
1163.7
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
1148.5
GTEX-13113-1526-SM-5EGHV
60-69 years, female
1136.0
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
1135.6
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
1112.8
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
1085.5
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
1058.5
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
1047.8
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
1042.6
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
1033.0
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
996.5
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
982.3
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
972.7
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
964.2
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
962.3
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
961.6
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
921.9
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
881.1
GTEX-1445S-2926-SM-5O993
60-69 years, male
880.2
GTEX-X261-2426-SM-4PQZU
50-59 years, male
877.7
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
863.3
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
862.7
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
848.2
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
834.6
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
829.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
825.9
GTEX-13O21-1926-SM-5MR39
50-59 years, male
819.0
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
815.4
GTEX-11P82-0926-SM-5986X
20-29 years, male
806.0
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
797.3
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
788.7
GTEX-Y111-2626-SM-4TT24
50-59 years, male
777.6
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
773.1
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
757.8
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
729.3
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
726.6
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
713.9
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
698.2
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
697.0
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
686.1
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
680.7
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
677.7
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
658.5
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
652.6
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
605.4
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
590.8
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
574.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
500.6
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
480.1
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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