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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 440.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 62.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 95.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 169.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 170.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 382.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 200.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 283.6
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 805.5
Min RPKM: 194.2
Std RPKM: 116.6
Median RPKM: 426.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
805.5
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
735.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
714.9
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
667.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
665.3
GTEX-S32W-1926-SM-4AD63
50-59 years, female
661.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
661.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
651.6
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
647.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
642.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
638.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
637.4
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
607.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
589.2
GTEX-12696-0826-SM-5EGGE
60-69 years, male
583.3
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
579.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
579.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
569.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
565.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
565.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
562.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
560.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
554.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
525.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
515.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
505.6
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
504.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
502.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
493.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
493.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
493.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
492.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
492.2
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
489.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
486.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
476.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
475.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
471.3
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
466.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
463.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
458.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
458.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
456.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
456.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
456.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
449.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
448.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
443.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
442.2
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
439.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
438.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
437.7
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
433.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
432.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
430.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
430.8
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
429.4
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
427.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
426.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
426.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
425.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
424.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
421.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
415.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
411.3
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
407.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
407.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
405.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
403.4
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
399.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
397.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
389.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
388.9
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
388.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
383.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
382.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
381.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
380.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
378.4
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
377.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
377.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
377.7
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
375.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
374.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
374.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
371.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
363.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
362.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
360.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
360.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
359.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
359.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
356.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
347.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
345.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
345.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
343.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
340.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
339.6
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
336.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
328.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
328.8
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
327.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
326.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
318.5
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
317.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
313.6
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
310.5
GTEX-1399T-0826-SM-5IFES
60-69 years, male
309.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
295.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
288.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
288.1
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
273.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
268.7
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
257.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
249.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
228.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
194.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
194.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
