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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 874.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 920
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1157.3
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 890.5
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 876.7
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 924.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1318.8
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 891.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1247
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 514.8
Min RPKM: 184.5
Std RPKM: 37.1
Median RPKM: 251.5
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
514.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
411.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
331.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
325.4
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
321.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
314.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
309.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
307.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
305.9
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
304.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
303.3
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
302.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
300.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
298.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
295.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
291.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
291.3
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
288.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
287.2
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
286.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
286.3
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
285.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
285.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
284.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
284.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
282.3
GTEX-V955-1926-SM-4KL1L
60-69 years, male
282.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
282.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
281.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
281.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
280.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
279.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
278.0
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
277.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
277.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
276.9
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
276.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
276.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
275.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
274.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
274.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
274.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
273.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
273.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
273.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
273.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
272.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
272.0
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
271.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
270.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
269.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
267.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
266.0
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
265.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
265.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
265.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
264.9
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
263.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
263.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
262.7
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
262.2
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
261.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
261.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
260.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
259.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
259.8
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
259.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
259.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
259.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
258.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
258.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
258.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
258.0
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
257.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
257.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
256.8
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
256.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
256.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
254.7
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
254.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
254.5
GTEX-S95S-1126-SM-4B64E
60-69 years, male
253.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
253.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
253.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
252.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
252.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
250.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
250.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
249.7
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
249.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
248.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
247.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
247.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
247.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
246.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
245.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
245.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
245.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
245.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
244.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
243.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
242.8
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
242.7
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
242.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
242.1
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
240.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
240.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
238.6
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
237.9
GTEX-REY6-0126-SM-48FDT
60-69 years, male
237.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
237.2
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
237.1
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
236.2
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
235.9
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
235.5
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
235.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
235.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
234.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
234.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
233.9
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
233.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
233.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
233.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
232.6
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
232.5
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
231.3
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
231.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
231.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
230.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
230.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
230.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
229.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
229.3
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
229.2
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
229.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
228.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
227.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
227.2
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
227.1
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
225.6
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
225.5
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
225.0
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
224.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
224.2
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
222.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
221.8
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
220.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
220.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
220.1
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
220.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
220.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
218.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
217.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
216.7
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
216.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
215.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
215.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
215.3
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
212.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
212.3
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
211.3
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
211.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
209.7
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
207.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
205.7
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
202.4
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
202.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
198.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
192.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
188.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
186.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
184.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.