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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 826.1
Min RPKM: 331.7
Std RPKM: 109.5
Median RPKM: 516.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
826.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
820.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
795.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
774.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
731.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
719.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
714.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
709.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
707.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
687.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
683.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
682.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
675.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
667.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
657.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
655.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
654.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
651.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
642.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
640.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
637.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
626.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
621.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
619.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
600.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
592.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
588.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
585.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
584.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
581.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
576.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
575.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
573.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
572.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
571.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
570.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
570.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
569.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
563.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
562.0
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
559.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
559.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
558.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
554.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
552.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
550.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
548.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
545.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
540.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
537.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
518.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
517.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
516.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
515.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
513.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
507.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
504.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
501.0
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
498.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
496.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
494.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
492.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
490.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
487.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
484.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
481.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
480.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
478.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
477.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
474.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
472.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
470.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
467.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
464.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
460.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
456.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
453.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
449.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
448.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
448.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
444.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
444.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
439.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
436.8
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
435.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
432.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
428.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
425.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
421.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
419.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
419.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
414.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
409.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
401.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
393.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
386.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
380.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
380.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
377.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
377.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
371.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
346.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
336.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
331.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.