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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 484.3
Min RPKM: 93.4
Std RPKM: 71.3
Median RPKM: 193.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
484.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
436.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
385.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
361.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
361.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
357.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
352.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
323.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
320.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
303.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
300.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
296.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
289.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
288.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
278.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
275.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
272.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
271.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
259.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
255.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
254.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
250.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
250.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
245.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
243.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
243.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
239.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
225.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
224.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
218.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
217.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
214.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
214.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
212.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
212.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
212.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
205.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
204.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
203.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
202.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
202.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
201.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
198.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
197.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
196.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
194.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
193.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
193.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
191.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
191.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
191.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
190.7
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
189.8
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
188.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
186.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
183.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
180.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
179.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
177.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
173.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
171.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
170.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
170.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
170.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
169.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
169.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
168.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
167.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
167.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
166.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
166.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
165.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
164.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
161.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
158.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
158.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
157.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
156.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
154.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
150.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
150.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
149.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
145.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
143.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
141.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
139.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
135.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
132.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
130.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
128.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
127.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
127.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
101.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
93.4
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.