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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 618.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 344.6
Min RPKM: 83.9
Std RPKM: 48.1
Median RPKM: 171.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
344.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
324.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
318.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
307.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
289.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
289.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
279.4
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
274.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
273.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
265.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
262.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
258.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
252.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
249.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
239.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
236.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
236.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
230.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
224.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
219.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
216.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
216.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
215.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
215.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
212.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
211.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
207.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
207.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
207.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
204.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
200.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
198.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
195.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
195.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
193.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
192.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
192.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
190.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
189.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
188.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
188.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
187.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
187.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
186.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
184.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
182.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
179.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
179.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
179.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
177.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
177.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
177.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
176.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
176.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
176.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
174.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
171.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
171.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
170.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
170.8
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
170.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
170.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
170.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
169.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
169.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
169.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
168.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
168.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
167.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
166.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
163.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
162.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
161.6
GTEX-WL46-2926-SM-3LK82
50-59 years, male
161.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
161.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
161.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
160.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
160.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
159.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
159.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
158.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
157.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
157.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
156.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
155.2
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
154.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
154.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
152.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
151.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
151.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
150.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
149.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
148.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
146.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
146.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
146.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
145.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
144.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
141.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
138.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
138.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
138.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
136.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
136.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
135.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
135.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
134.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
129.6
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
127.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
121.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
117.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
103.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
88.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
83.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 190.0
Samples: 108
Max RPKM: 484.8
Min RPKM: 75.8
Std RPKM: 64.0
Median RPKM: 175.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
484.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
399.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
375.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
367.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
341.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
310.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
305.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
292.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
278.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
275.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
258.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
256.4
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
247.8
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
247.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
239.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
238.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
238.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
236.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
231.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
230.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
230.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
228.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
227.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
226.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
225.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
222.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
217.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
216.7
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
212.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
212.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
208.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
207.5
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
205.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
204.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
204.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
200.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
199.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
199.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
199.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
191.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
185.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
185.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
185.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
185.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
184.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
183.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
182.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
181.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
179.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
178.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
178.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
176.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
175.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
175.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
174.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
173.1
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
172.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
170.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
169.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
169.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
169.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
169.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
167.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
167.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
167.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
166.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
162.0
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
162.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
162.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
160.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
160.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
157.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
157.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
155.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
155.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
153.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
152.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
151.5
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
151.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
150.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
150.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
148.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
147.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
146.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
144.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
144.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
143.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
142.1
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
140.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
140.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
139.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
138.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
137.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
137.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
136.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
135.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
133.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
133.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
133.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
127.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
126.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
122.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
120.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
117.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
103.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
102.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
90.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
75.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.