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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 529.1
Min RPKM: 90.4
Std RPKM: 63.6
Median RPKM: 179.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
529.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
454.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
394.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
343.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
292.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
280.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
277.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
273.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
273.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
268.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
267.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
262.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
261.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
255.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
252.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
251.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
248.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
248.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
244.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
243.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
242.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
241.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
239.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
238.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
228.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
226.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
224.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
224.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
223.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
221.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
218.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
212.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
210.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
209.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
207.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
206.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
205.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
202.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
199.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
198.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
198.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
198.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
195.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
190.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
189.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
189.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
189.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
188.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
188.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
188.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
188.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
187.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
185.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
185.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
183.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
182.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
181.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
179.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
179.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
178.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
178.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
177.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
177.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
176.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
175.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
174.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
172.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
171.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
169.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
168.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
167.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
165.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
165.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
165.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
163.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
163.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
161.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
161.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
160.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
157.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
157.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
155.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
155.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
155.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
154.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
153.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
153.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
151.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
151.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
149.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
149.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
148.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
147.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
146.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
145.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
144.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
144.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
144.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
143.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
142.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
142.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
140.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
138.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
138.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
137.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
136.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
135.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
135.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
133.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
132.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
127.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
124.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
121.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
114.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
106.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
91.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
90.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.