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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2523.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1744.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1342.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2277.8
Min RPKM: 246.8
Std RPKM: 217.3
Median RPKM: 515.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2277.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1589.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1450.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1330.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1199.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1012.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1010.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
955.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
944.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
902.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
900.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
889.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
882.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
863.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
857.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
846.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
829.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
816.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
804.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
796.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
791.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
791.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
772.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
757.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
755.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
754.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
752.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
752.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
751.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
749.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
733.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
725.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
724.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
714.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
713.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
700.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
694.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
693.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
685.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
682.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
670.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
665.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
661.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
655.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
654.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
654.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
650.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
645.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
636.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
629.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
621.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
616.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
616.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
612.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
611.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
611.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
606.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
606.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
604.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
603.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
603.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
601.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
599.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
598.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
594.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
594.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
592.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
590.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
580.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
579.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
577.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
574.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
574.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
574.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
573.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
571.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
568.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
566.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
565.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
564.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
563.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
563.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
561.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
560.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
555.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
554.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
550.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
549.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
548.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
545.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
542.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
542.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
540.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
539.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
538.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
535.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
534.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
534.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
530.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
528.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
527.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
526.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
524.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
521.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
519.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
518.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
516.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
514.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
513.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
511.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
511.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
510.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
510.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
510.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
508.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
506.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
505.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
503.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
502.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
501.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
500.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
500.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
500.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
499.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
499.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
498.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
497.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
497.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
496.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
496.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
495.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
493.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
493.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
493.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
492.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
492.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
490.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
490.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
487.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
483.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
481.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
480.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
479.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
478.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
477.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
476.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
474.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
473.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
473.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
471.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
470.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
469.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
466.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
465.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
462.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
460.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
460.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
454.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
453.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
452.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
452.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
451.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
451.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
449.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
447.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
446.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
445.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
444.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
444.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
442.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
440.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
439.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
438.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
435.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
435.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
434.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
432.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
431.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
430.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
423.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
421.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
416.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
416.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
410.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
408.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
406.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
405.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
403.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
403.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
397.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
397.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
394.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
393.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
390.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
389.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
389.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
387.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
386.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
378.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
378.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
373.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
366.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
360.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
340.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
339.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
335.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
335.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
325.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
321.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
319.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
312.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
303.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
286.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
246.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.