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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 177.7
Min RPKM: 7.2
Std RPKM: 44.4
Median RPKM: 53.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
177.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
164.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
159.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
157.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
152.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
148.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
148.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
146.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
139.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
130.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
129.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
126.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
123.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
106.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
105.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
104.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
103.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
102.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
100.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
100.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
95.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
93.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
91.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
90.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
88.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
81.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
77.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
72.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
72.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
72.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
71.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
71.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
70.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
70.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
69.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
67.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
66.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
65.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
64.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
63.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
63.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
59.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
57.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
57.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
56.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
55.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
53.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
53.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
51.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
51.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
50.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
47.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
40.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
37.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
37.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
36.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
35.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
35.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
32.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
32.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
32.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
32.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
32.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
30.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
29.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
29.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
28.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
27.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
26.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
23.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
22.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
20.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
20.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
19.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
19.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
19.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
18.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
17.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
17.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
15.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
15.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
13.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
12.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
11.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
10.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
10.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
10.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
10.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
10.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
9.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
9.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
8.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
7.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
7.2
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.