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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 519.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 247.0
Min RPKM: 25.3
Std RPKM: 52.6
Median RPKM: 152.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
247.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
244.0
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
242.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
238.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
230.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
227.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
218.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
218.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
215.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
212.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
211.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
208.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
207.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
206.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
205.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
205.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
204.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
204.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
200.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
199.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
199.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
198.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
198.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
197.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
192.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
191.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
190.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
188.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
188.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
185.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
183.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
183.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
183.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
183.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
183.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
182.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
182.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
182.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
182.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
180.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
177.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
177.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
174.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
172.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
168.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
165.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
165.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
164.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
163.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
162.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
162.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
161.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
159.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
159.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
158.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
155.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
153.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
150.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
149.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
149.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
148.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
147.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
146.2
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
144.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
141.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
141.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
141.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
140.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
139.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
139.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
137.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
136.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
135.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
128.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
127.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
127.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
123.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
122.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
120.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
118.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
117.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
116.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
113.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
112.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
111.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
108.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
101.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
98.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
94.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
90.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
90.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
89.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
86.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
85.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
84.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
83.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
83.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
77.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
74.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
73.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
73.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
72.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
72.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
71.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
71.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
69.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
67.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
65.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
57.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
55.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
54.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
49.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
36.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
25.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 160.9
Samples: 108
Max RPKM: 328.4
Min RPKM: 24.1
Std RPKM: 71.7
Median RPKM: 173.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
328.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
298.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
279.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
269.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
267.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
267.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
261.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
254.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
252.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
249.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
244.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
243.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
243.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
235.9
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
235.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
234.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
233.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
233.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
233.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
229.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
228.5
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
223.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
223.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
222.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
221.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
221.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
219.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
218.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
214.1
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
212.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
207.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
204.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
203.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
202.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
202.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
201.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
198.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
197.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
196.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
195.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
193.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
193.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
192.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
191.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
187.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
187.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
186.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
184.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
182.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
182.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
181.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
176.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
175.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
174.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
172.4
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
171.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
167.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
165.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
161.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
161.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
159.9
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
158.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
156.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
152.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
147.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
146.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
145.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
145.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
144.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
143.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
141.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
139.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
134.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
129.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
127.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
124.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
123.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
115.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
111.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
108.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
106.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
98.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
96.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
89.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
87.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
82.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
80.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
79.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
76.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
72.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
72.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
71.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
68.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
65.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
57.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
56.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
54.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
52.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
49.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
47.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
40.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
40.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
36.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
36.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
29.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
26.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
25.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
24.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.