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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 207.1
Min RPKM: 8.2
Std RPKM: 36.0
Median RPKM: 57.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
207.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
173.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
144.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
143.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
141.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
127.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
127.2
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
124.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
119.7
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
119.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
118.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
117.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
111.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
109.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
105.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
101.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
101.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
97.9
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
92.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
90.6
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
88.2
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
85.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
84.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
83.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
78.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
75.2
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
74.1
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
73.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
73.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
73.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
72.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
72.3
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
70.7
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
70.5
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
70.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
69.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
68.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
68.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
67.6
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
65.2
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
63.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
62.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
62.0
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
59.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
58.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
58.5
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
58.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
58.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
57.6
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
56.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
55.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
54.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
53.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
53.1
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
52.9
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
52.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
52.2
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
52.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
52.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
51.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
49.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
49.8
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
49.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
47.0
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
45.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
45.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
43.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
42.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
42.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
40.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
40.4
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
39.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
39.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
39.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
38.5
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
37.8
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
37.4
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
35.5
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
35.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
34.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
33.2
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
32.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
32.6
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
32.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
31.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
31.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
29.7
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
27.5
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
26.6
GTEX-11I78-2026-SM-5987C
50-59 years, female
25.9
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
22.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
21.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
19.7
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
19.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
18.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
8.2
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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