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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 727.6
Min RPKM: 134.8
Std RPKM: 92.0
Median RPKM: 365.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
727.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
592.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
570.1
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
510.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
510.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
506.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
501.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
487.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
483.0
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
464.2
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
463.2
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
461.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
447.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
442.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
431.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
421.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
414.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
411.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
409.6
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
407.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
407.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
407.5
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
407.3
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
403.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
402.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
401.1
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
400.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
394.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
391.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
390.5
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
387.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
387.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
385.6
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
384.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
384.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
384.6
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
383.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
382.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
381.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
379.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
373.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
372.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
372.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
371.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
371.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
368.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
367.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
365.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
365.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
364.7
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
360.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
357.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
350.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
347.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
344.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
338.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
336.8
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
329.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
329.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
329.6
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
323.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
318.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
315.1
GTEX-11I78-1926-SM-59878
50-59 years, female
314.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
313.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
312.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
312.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
311.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
311.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
307.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
307.5
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
306.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
304.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
304.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
295.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
294.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
290.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
283.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
279.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
276.3
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
275.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
272.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
265.9
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
263.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
259.3
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
252.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
246.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
244.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
243.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
240.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
230.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
224.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
200.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
194.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
181.6
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
180.2
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
134.8
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.