Fields »
ABOUTMENU
HELP
NEWS
SERPINE2
COLON - Expression summary
RNA expressioni
HPA:23.0TPM
GTEx:9.2RPKM
FANTOM5:13.8Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 23.0
overview Male, age 54 Sample 1
TPM: 23.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 40.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 63
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 28.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 21.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 9.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 10.2
Samples: 149

Max RPKM: 54.6
Min RPKM: 0.2
Std RPKM: 9.3
Median RPKM: 7.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 54.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 45.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 38.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 35.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 35.2
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 33.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 33.4
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 31.8
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 30.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 29.0
Show all
Colon - Transverse
RPKM: 8.5
Samples: 196

Max RPKM: 293.9
Min RPKM: 0.8
Std RPKM: 23.1
Median RPKM: 3.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 293.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 81.9
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 71.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 48.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 43.3
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 41.6
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 40.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 35.5
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 34.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 30.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 13.8
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 46.7
FF:10014-101C5 62,83,84 years, mixed 13.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.