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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 118.8
Min RPKM: 7.2
Std RPKM: 25.9
Median RPKM: 44.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
118.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
105.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
100.9
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
100.3
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
95.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
91.5
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
91.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
90.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
88.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
87.9
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
86.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
80.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
79.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
77.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
77.7
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
75.7
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
72.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
70.9
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
69.7
GTEX-QCQG-1226-SM-48U23
50-59 years, female
69.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
67.7
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
63.9
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
63.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
63.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
62.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
61.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
60.5
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
58.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
58.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
58.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
56.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
56.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
56.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
55.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
55.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
54.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
52.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
51.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
50.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
50.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
49.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
49.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
49.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
47.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
46.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
45.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
45.1
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
45.1
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
44.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
43.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
41.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
40.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
39.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
38.8
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
37.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
36.5
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
36.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
33.8
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
33.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
33.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
33.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
33.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
33.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
32.6
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
31.1
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
30.4
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
29.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
29.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
29.5
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
28.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
28.9
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
28.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
27.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
25.1
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
24.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
22.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
21.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
21.3
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
20.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
19.8
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
19.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
18.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
18.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
18.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
16.0
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
15.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
15.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
14.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
14.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
14.1
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
13.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
9.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
8.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
7.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
7.4
GTEX-11I78-2026-SM-5987C
50-59 years, female
7.2
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.