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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 500.5
Min RPKM: 29.9
Std RPKM: 117.4
Median RPKM: 169.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
500.5
GTEX-111YS-1426-SM-5GID8
60-69 years, male
498.0
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
450.4
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
426.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
418.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
404.7
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
401.7
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
399.9
GTEX-ZTSS-0926-SM-59865
40-49 years, male
399.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
391.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
372.8
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
369.7
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
352.7
GTEX-1122O-1326-SM-5H11F
60-69 years, female
345.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
337.8
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
329.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
317.7
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
314.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
307.0
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
306.5
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
306.5
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
301.2
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
280.2
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
275.8
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
271.4
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
263.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
254.7
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
246.7
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
230.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
228.1
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
219.6
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
214.2
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
206.3
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
203.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
200.9
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
197.9
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
197.3
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
196.3
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
188.4
GTEX-13113-1226-SM-5EGHT
60-69 years, female
187.3
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
178.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
177.7
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
175.2
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
170.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
168.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
167.2
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
163.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
160.3
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
153.5
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
151.8
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
146.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
142.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
136.0
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
131.3
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
130.4
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
128.0
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
126.9
GTEX-13O61-1326-SM-5KM31
60-69 years, male
123.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
121.3
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
119.8
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
112.7
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
112.2
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
110.5
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
108.6
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
107.5
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
104.0
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
104.0
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
102.2
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
102.0
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
99.7
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
99.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
96.3
GTEX-1192X-2526-SM-59868
50-59 years, male
95.7
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
93.0
GTEX-117YX-0326-SM-5GICL
50-59 years, male
88.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
88.0
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
88.0
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
78.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
78.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
74.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
74.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
70.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
66.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
61.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
60.8
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
54.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
51.7
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
29.9
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.