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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 329.8
Min RPKM: 41.4
Std RPKM: 56.5
Median RPKM: 120.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
329.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
282.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
282.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
242.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
239.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
217.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
214.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
213.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
208.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
208.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
202.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
198.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
197.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
196.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
196.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
183.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
182.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
182.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
181.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
174.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
172.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
172.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
164.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
164.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
163.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
162.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
162.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
160.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
160.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
160.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
158.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
157.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
157.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
155.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
153.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
149.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
148.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
147.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
145.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
143.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
142.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
142.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
142.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
141.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
140.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
137.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
134.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
132.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
123.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
123.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
121.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
121.3
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
120.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
119.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
117.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
116.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
115.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
115.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
113.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
111.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
110.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
110.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
109.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
109.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
108.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
108.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
107.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
106.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
105.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
104.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
99.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
96.4
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
89.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
88.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
87.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
86.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
86.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
83.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
83.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
82.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
81.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
77.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
76.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
76.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
75.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
73.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
71.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
71.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
68.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
65.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
65.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
64.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
64.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
64.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
63.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
61.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
58.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
57.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
55.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
50.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
46.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
46.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
45.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
41.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.