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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 390.6
Min RPKM: 60.2
Std RPKM: 60.2
Median RPKM: 175.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
390.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
368.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
322.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
298.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
298.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
292.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
292.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
288.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
281.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
278.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
269.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
264.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
258.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
257.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
254.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
249.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
241.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
238.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
235.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
235.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
232.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
232.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
231.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
230.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
223.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
220.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
219.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
216.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
214.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
213.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
211.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
210.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
209.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
207.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
207.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
206.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
205.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
204.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
203.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
200.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
200.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
200.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
198.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
198.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
195.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
195.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
194.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
193.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
192.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
191.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
189.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
188.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
185.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
185.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
183.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
180.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
178.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
178.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
175.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
174.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
171.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
169.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
168.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
168.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
165.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
165.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
164.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
160.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
160.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
156.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
155.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
152.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
150.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
150.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
149.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
149.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
148.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
147.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
147.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
147.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
146.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
143.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
142.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
142.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
141.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
140.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
139.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
138.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
137.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
136.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
136.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
135.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
134.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
134.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
134.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
133.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
132.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
132.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
131.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
128.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
126.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
125.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
125.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
117.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
112.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
112.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
111.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
110.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
109.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
106.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
104.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
94.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
92.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
85.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
80.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
60.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
60.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.