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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 339.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 338.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 205.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1513.5
Min RPKM: 35.0
Std RPKM: 311.8
Median RPKM: 170.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
1513.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
1509.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
1500.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1349.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
1325.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
1213.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1207.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
1092.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
1051.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
1017.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
989.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
982.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
968.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
968.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
897.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
889.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
827.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
813.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
812.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
779.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
772.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
767.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
754.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
745.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
684.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
677.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
663.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
644.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
637.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
612.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
609.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
574.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
559.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
557.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
551.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
526.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
525.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
525.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
502.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
491.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
485.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
483.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
481.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
473.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
472.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
453.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
446.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
432.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
425.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
410.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
403.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
401.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
394.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
366.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
362.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
360.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
359.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
356.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
354.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
353.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
353.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
342.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
341.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
340.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
339.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
323.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
319.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
318.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
316.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
309.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
304.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
299.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
291.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
286.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
283.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
276.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
270.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
268.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
267.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
267.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
258.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
254.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
254.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
247.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
242.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
241.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
230.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
227.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
226.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
211.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
207.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
207.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
206.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
201.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
199.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
199.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
192.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
191.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
185.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
181.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
179.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
178.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
175.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
174.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
173.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
173.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
170.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
169.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
169.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
166.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
164.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
163.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
163.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
162.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
161.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
159.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
156.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
152.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
152.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
145.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
145.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
142.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
141.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
141.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
139.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
139.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
139.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
134.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
132.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
131.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
129.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
129.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
127.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
126.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
125.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
124.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
124.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
124.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
120.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
114.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
112.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
111.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
109.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
108.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
105.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
105.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
104.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
103.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
103.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
100.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
99.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
98.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
97.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
96.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
96.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
96.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
96.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
95.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
95.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
94.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
91.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
90.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
90.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
90.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
87.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
87.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
85.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
83.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
82.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
80.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
80.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
79.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
79.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
77.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
76.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
76.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
74.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
74.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
74.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
74.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
72.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
69.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
68.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
67.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
66.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
66.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
65.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
65.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
64.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
64.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
63.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
63.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
61.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
61.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
61.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
61.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
59.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
58.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
57.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
56.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
56.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
54.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
54.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
52.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
50.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
50.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
47.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
47.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
45.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
45.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
44.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
44.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
37.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
35.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.