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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 123.0
Min RPKM: 4.4
Std RPKM: 29.3
Median RPKM: 45.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
123.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
115.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
110.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
108.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
100.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
99.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
95.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
94.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
93.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
93.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
86.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
84.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
82.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
82.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
81.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
81.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
80.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
78.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
78.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
77.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
76.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
74.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
73.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
73.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
70.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
70.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
70.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
68.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
67.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
66.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
65.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
62.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
62.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
62.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
60.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
60.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
60.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
60.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
59.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
58.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
58.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
57.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
57.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
57.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
56.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
55.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
54.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
53.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
51.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
51.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
51.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
50.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
49.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
48.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
48.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
48.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
47.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
45.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
45.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
44.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
43.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
42.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
40.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
40.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
39.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
37.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
36.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
36.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
34.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
34.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
33.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
33.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
31.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
29.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
28.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
27.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
27.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
26.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
26.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
26.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
24.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
22.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
21.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
21.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
20.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
20.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
18.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
18.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
17.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
17.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
17.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
16.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
16.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
15.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
15.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
14.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
14.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
14.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
14.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
13.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
12.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
12.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
11.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
10.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
10.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
9.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
8.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
7.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
7.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
7.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
7.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
7.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
7.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
6.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
5.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
4.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
4.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.