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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 347.8
Min RPKM: 101.8
Std RPKM: 50.7
Median RPKM: 181.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
347.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
314.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
302.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
295.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
293.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
293.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
289.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
280.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
268.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
265.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
264.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
261.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
256.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
252.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
246.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
239.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
238.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
237.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
236.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
231.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
229.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
228.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
227.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
225.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
223.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
222.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
222.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
221.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
221.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
221.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
220.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
218.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
214.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
212.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
209.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
203.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
201.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
200.4
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
199.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
198.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
197.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
194.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
189.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
189.3
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
187.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
185.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
185.3
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
185.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
182.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
182.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
182.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
181.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
180.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
180.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
179.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
177.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
176.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
175.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
175.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
172.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
172.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
171.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
169.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
168.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
168.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
167.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
164.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
163.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
163.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
162.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
161.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
160.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
160.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
159.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
156.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
156.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
155.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
154.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
154.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
154.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
153.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
150.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
148.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
147.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
145.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
145.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
141.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
139.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
136.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
133.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
133.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
132.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
132.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
131.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
131.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
129.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
129.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
124.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
123.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
117.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
117.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
108.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
105.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
101.8
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.