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COLON - Expression summary
RNA expressioni
HPA:18.0TPM
GTEx:12.1RPKM
FANTOM5:40.5Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 18.0
overview Male, age 54 Sample 1
TPM: 22.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 26.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 19.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 18.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 12.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 11.6
Samples: 149

Max RPKM: 18.9
Min RPKM: 7.5
Std RPKM: 1.8
Median RPKM: 11.5
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 18.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 17.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 17.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 15.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 15.7
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 15.6
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 15.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 14.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 14.9
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 14.9
Show all
Colon - Transverse
RPKM: 12.5
Samples: 196

Max RPKM: 64.9
Min RPKM: 7.8
Std RPKM: 4.8
Median RPKM: 11.8
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 64.9
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 39.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 24.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 21.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 21.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 18.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 17.2
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 17.1
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 16.6
GTEX-144GM-1226-SM-5LU52 20-29 years, male 16.4
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 40.5
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 44.6
FF:10014-101C5 62,83,84 years, mixed 40.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.