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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 48.6
Min RPKM: 3.4
Std RPKM: 8.6
Median RPKM: 14.8
GTEX-ZTSS-0926-SM-59865
40-49 years, male
48.6
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
34.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
33.6
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
33.1
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
31.6
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
31.3
GTEX-1122O-1326-SM-5H11F
60-69 years, female
30.3
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
30.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
30.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
29.1
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
29.1
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
27.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
27.0
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
25.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
25.5
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
25.3
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
24.1
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
22.9
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
22.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
22.5
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
21.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
21.8
GTEX-111YS-1426-SM-5GID8
60-69 years, male
21.3
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
20.7
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
20.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
19.5
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
19.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
19.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
19.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
19.0
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
17.7
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
17.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
17.1
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
17.1
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
16.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
16.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
16.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
16.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
16.5
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
16.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
15.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
15.1
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
15.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
14.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
14.8
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
13.8
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
13.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
12.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
12.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
12.5
GTEX-13113-1226-SM-5EGHT
60-69 years, female
12.0
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
11.8
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
11.7
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
11.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
11.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
11.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
10.9
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
10.7
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
10.5
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
10.5
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
10.2
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
10.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
10.1
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
10.1
GTEX-1192X-2526-SM-59868
50-59 years, male
10.0
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
9.8
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
9.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
9.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
9.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
9.0
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
9.0
GTEX-13111-1426-SM-5DUW3
50-59 years, male
8.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
8.1
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
8.0
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
7.9
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
7.9
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
7.4
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
7.2
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
7.0
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
6.8
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
6.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
6.6
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
6.1
GTEX-117YX-0326-SM-5GICL
50-59 years, male
5.7
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
5.7
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
5.6
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
4.8
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
3.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
