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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1461.2
Min RPKM: 29.9
Std RPKM: 424.1
Median RPKM: 263.7
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
1461.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
1412.2
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
1394.5
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
1355.2
GTEX-11I78-2026-SM-5987C
50-59 years, female
1279.9
GTEX-S341-1226-SM-4AD5S
40-49 years, female
1189.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
1115.8
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
1113.3
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
1098.2
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
1089.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
1040.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
1035.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
1019.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
978.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
969.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
949.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
935.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
931.5
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
908.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
895.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
893.8
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
875.4
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
794.0
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
792.7
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
779.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
776.7
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
708.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
654.2
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
652.0
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
626.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
626.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
618.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
599.4
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
595.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
551.8
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
469.9
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
467.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
417.3
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
386.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
363.1
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
360.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
355.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
330.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
314.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
304.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
302.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
292.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
269.1
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
258.3
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
229.6
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
188.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
165.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
153.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
152.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
124.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
116.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
112.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
96.7
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
95.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
89.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
89.7
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
89.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
85.2
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
83.2
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
82.2
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
80.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
78.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
75.7
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
75.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
71.9
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
70.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
67.4
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
67.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
62.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
61.2
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
57.6
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
54.8
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
52.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
49.6
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
47.9
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
43.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
42.3
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
41.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
41.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
40.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
40.6
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
39.7
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
39.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
38.1
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
37.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
37.3
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
36.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
35.0
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
33.6
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
30.9
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
29.9
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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