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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1280.1
Min RPKM: 4.6
Std RPKM: 354.3
Median RPKM: 35.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
1280.1
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
1242.4
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
1233.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
1135.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
886.6
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
881.7
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
855.2
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
742.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
101.7
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
99.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
93.8
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
77.1
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
65.1
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
64.5
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
59.8
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
58.0
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
57.3
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
49.4
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
49.4
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
48.1
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
45.3
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
44.5
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
43.9
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
43.5
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
43.3
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
42.2
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
37.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
36.1
GTEX-13O21-1926-SM-5MR39
50-59 years, male
35.4
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
34.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
32.8
GTEX-1445S-2926-SM-5O993
60-69 years, male
32.6
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
32.6
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
32.6
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
31.3
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
30.1
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
30.1
GTEX-X261-2426-SM-4PQZU
50-59 years, male
27.8
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
24.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
23.9
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
23.4
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
23.4
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
22.3
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
20.7
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
20.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
19.0
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
18.3
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
16.5
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
15.8
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
13.7
GTEX-Y111-2626-SM-4TT24
50-59 years, male
12.9
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
12.6
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
12.4
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
10.3
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
9.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
6.5
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
4.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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