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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 24.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 38.2
Min RPKM: 2.5
Std RPKM: 6.5
Median RPKM: 13.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
38.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
35.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
30.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
28.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
28.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
28.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
27.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
26.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
25.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
25.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
24.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
24.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
23.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
23.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
22.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
22.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
22.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
22.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
21.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
21.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
21.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
20.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
20.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
20.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
19.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
19.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
19.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
18.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
18.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
18.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
17.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
17.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
17.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
17.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
17.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
16.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
16.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
16.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
16.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
16.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
16.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
16.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
16.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
16.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
15.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
15.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
15.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
15.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
15.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
15.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
15.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
14.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
14.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
14.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
13.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
13.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
13.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
13.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
13.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
13.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
13.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
13.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
13.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
12.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
12.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
12.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
12.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
12.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
12.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
12.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
12.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
12.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
11.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
11.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
11.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
11.8
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
11.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
11.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
11.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
11.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
11.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
11.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
11.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
11.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
10.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
10.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
10.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
10.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
10.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
10.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
10.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
9.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
9.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
9.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
9.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
9.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
9.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
9.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
9.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
9.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
8.9
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
8.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
8.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
7.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
7.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
7.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
7.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
6.6
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
6.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
6.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
5.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
4.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
4.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
2.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 14.2
Samples: 108
Max RPKM: 43.8
Min RPKM: 3.2
Std RPKM: 7.0
Median RPKM: 12.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
43.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
36.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
28.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
28.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
27.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
26.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
26.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
26.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
25.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
25.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
25.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
24.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
24.5
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
21.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
20.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
20.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
20.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
19.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
19.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
19.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
19.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
18.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
18.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
18.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
17.7
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
17.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
17.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
17.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
17.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
16.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
16.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
16.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
16.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
16.2
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
16.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
16.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
15.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
15.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
15.6
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
15.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
15.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
15.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
15.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
15.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
14.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
14.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
14.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
14.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
14.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
14.2
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
14.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
13.8
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
13.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
13.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
12.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
12.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
12.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
12.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
12.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
12.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
12.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
11.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
11.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
11.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
11.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
11.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
11.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
10.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
10.6
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
10.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
10.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
10.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
10.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
10.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
9.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
9.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
9.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
9.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
9.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
9.0
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
8.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
8.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
8.9
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
8.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
8.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
8.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
8.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
8.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
8.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
8.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
8.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
7.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
7.5
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
7.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
6.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
6.9
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
6.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
6.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
6.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
6.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
6.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
5.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
5.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
5.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
4.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
3.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
3.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
3.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 5
