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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 47.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 249.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 76.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 90
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 320
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 448.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 211.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 183.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 12114.1
Min RPKM: 1.4
Std RPKM: 3267.5
Median RPKM: 1168.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
12114.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
11477.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
11410.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
11035.4
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
10615.7
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
10310.6
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
9856.3
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
9484.7
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
8611.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
8262.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
8144.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
7792.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
7483.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
7007.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
6856.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
6780.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
6611.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
6587.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
6272.6
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
6196.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
6032.9
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
6017.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
5915.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
5896.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
5884.1
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
5755.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
5570.1
GTEX-12696-0826-SM-5EGGE
60-69 years, male
5548.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
5233.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
5213.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
5158.2
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
5087.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
4966.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
4850.2
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
4282.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
4038.1
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
3841.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
3839.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
3734.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
3669.0
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
3458.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
3382.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
3365.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
3243.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
3177.3
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
3023.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
2603.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
2519.9
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
2453.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
2270.3
GTEX-RU72-1426-SM-46MUF
50-59 years, female
2039.7
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
2022.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
1979.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
1767.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
1596.0
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
1531.6
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
1424.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
1237.5
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
1195.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
1168.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
1159.6
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
1096.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
1068.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
1018.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
1008.6
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
920.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
871.5
GTEX-REY6-1226-SM-48FDR
60-69 years, male
782.5
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
777.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
694.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
603.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
577.2
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
562.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
553.1
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
551.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
527.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
337.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
271.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
263.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
261.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
261.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
254.5
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
225.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
223.1
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
181.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
135.5
GTEX-YECK-1926-SM-4W21H
60-69 years, male
116.4
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
88.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
80.7
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
76.8
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
73.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
68.4
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
65.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
57.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
52.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
45.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
43.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
43.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
38.4
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
35.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
35.3
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
23.0
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
22.2
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
18.3
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
13.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
10.9
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
10.3
GTEX-QESD-2026-SM-447BI
20-29 years, male
10.1
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
9.9
GTEX-RN64-1826-SM-48FDV
50-59 years, male
9.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
8.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
6.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
4.6
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
4.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
4.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
3.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
3.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
2.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
1.4
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.