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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The interactive Survival Scatter plot allows for the cutoff to be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Survival analysis". Under the Survival Scatter plot the p-score landscape is shown together with the difference in median between survival time for patients who have died with respect to high and low expression. This is intended to aid the user in exploring custom cutoffs.
Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off).
HMGCS2 is prognostic, high expression is favourable in liver cancer
Stage:
Survival analysis
Current cut off: Best expression cut offi
Based on the FPKM value of each gene, we classified the patients into two groups and examined their prognoses. In the analysis, we excluded genes with low expression, i.e., those with a median expression among samples less than FPKM 1. The prognosis of each group of patients was examined by Kaplan-Meier survival estimators, and the survival outcomes of the two groups were compared by log-rank tests. To choose the best FPKM cut-offs for grouping the patients most significantly, all FPKM values from the 20th to 80th percentiles were used to group the patients, significant differences in the survival outcomes of the groups were examined and the value yielding the lowest log-rank P value is selected.
: 265.41
Median expression: N/A
Median follow up time: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
441.7
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
2036.3
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
1887.0
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
1664.6
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
1607.3
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
1592.4
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
1556.3
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
1525.5
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
1440.7
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
1426.7
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
1426.2
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
1363.7
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
1330.8
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
1327.2
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
1298.8
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
1261.0
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
1200.9
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
1134.0
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
1132.8
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
1125.4
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
1089.0
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
1073.9
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
1073.5
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
1064.8
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
1064.1
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
1044.5
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
1037.0
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
987.7
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
987.0
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
971.4
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
966.9
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
956.7
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
955.4
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
942.6
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
932.9
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
921.1
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
910.4
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
908.2
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
895.7
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
893.8
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
877.9
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
876.8
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
866.9
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
861.2
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
851.8
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
842.7
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
826.1
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
807.7
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
798.9
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
783.1
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
760.4
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
757.3
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
752.5
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
747.8
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
741.1
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
740.4
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
737.0
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
726.1
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
715.3
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
714.6
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
705.6
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
701.9
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
698.0
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
697.7
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
694.6
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
692.9
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
687.8
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
685.8
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
685.0
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
684.7
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
682.4
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
679.9
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
669.1
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
669.1
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
665.4
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
663.6
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
658.2
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
654.5
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
652.8
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
646.1
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
643.2
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
640.5
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
630.8
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
626.4
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
625.8
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
617.4
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
610.3
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
608.9
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
607.5
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
605.6
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
593.4
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
587.3
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
581.2
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
578.7
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
568.7
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
568.4
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
566.9
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
559.8
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
552.6
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
550.5
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
550.0
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
548.2
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
545.7
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
544.1
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
543.8
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
543.7
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
543.2
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
542.6
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
542.3
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
533.3
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
530.4
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
530.3
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
525.3
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
520.7
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
519.1
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
514.1
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
512.7
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
510.9
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
510.4
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
509.7
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
508.7
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
504.8
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
504.6
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
502.5
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
501.7
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
500.8
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
500.4
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
488.8
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
485.4
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
484.7
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
484.0
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
482.3
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
481.7
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
476.3
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
475.3
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
473.9
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
473.2
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
471.9
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
470.4
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
469.5
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
463.7
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
461.1
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
460.2
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
456.3
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
456.1
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
455.2
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
455.0
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
452.7
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
448.9
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
444.5
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
443.8
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
442.8
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
442.2
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
437.3
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
436.9
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
436.3
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
436.2
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
436.1
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
434.1
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
427.8
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
419.2
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
417.9
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
415.5
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
414.6
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
413.1
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
409.9
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
406.8
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
404.3
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
395.8
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
388.3
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
384.4
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
384.4
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
382.2
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
380.1
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
379.2
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
378.4
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
377.0
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
375.8
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
367.1
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
366.8
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
361.3
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
358.3
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
354.0
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
353.6
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
348.9
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
348.0
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
343.4
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
342.1
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
342.0
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
341.9
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
341.2
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
340.6
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
337.7
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
333.5
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
332.5
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
330.6
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
329.1
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
327.5
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
326.5
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
325.4
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
317.6
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
315.8
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
314.2
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
314.1
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
313.7
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
313.6
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
311.5
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
311.3
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
309.8
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
306.3
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
306.2
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
305.4
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
302.5
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
302.1
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
300.7
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
300.7
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
300.5
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
292.8
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
292.3
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
291.4
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
290.9
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
290.8
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
290.3
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
289.1
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
288.5
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
282.9
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
282.3
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
279.0
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
276.1
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
274.5
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
274.4
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
272.5
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
268.6
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
267.9
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
267.6
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
267.3
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
266.7
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
265.8
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
265.1
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
264.1
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
261.2
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
258.3
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
257.2
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
256.7
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
254.8
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
254.1
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
252.4
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
252.4
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
245.0
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
243.7
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
243.7
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
242.9
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
241.2
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
240.5
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
238.9
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
238.7
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
238.0
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
236.9
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
234.4
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
233.5
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
233.1
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
232.9
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
231.4
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
228.4
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
228.3
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
225.4
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
220.2
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
211.8
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
209.0
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
207.6
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
203.3
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
202.9
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
201.2
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
200.6
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
197.2
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
197.0
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
192.4
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
190.0
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
189.6
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
188.5
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
187.9
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
187.9
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
187.8
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
184.7
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
180.3
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
179.0
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
179.0
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
178.2
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
175.8
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
174.6
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
171.4
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
170.1
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
165.3
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
164.0
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
160.9
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
160.9
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
160.5
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
159.0
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
158.6
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
153.5
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
153.3
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
152.9
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
151.1
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
150.5
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
150.3
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
147.8
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
143.3
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
135.8
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
133.1
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
130.9
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
129.8
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
127.0
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
126.9
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
125.3
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
121.9
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
118.0
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
117.4
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
114.1
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
114.0
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
112.7
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
110.5
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
109.9
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
107.4
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
102.7
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
102.5
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
99.7
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
95.4
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
91.9
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
84.7
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
78.9
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
78.7
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
78.7
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
71.5
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
69.4
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
68.3
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
66.8
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
65.2
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
65.0
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
51.7
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
48.9
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
45.7
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
38.3
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
38.2
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
38.1
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
35.5
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
34.9
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
34.5
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
31.1
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
30.2
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
29.3
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
29.1
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
26.3
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
21.8
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
16.8
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
7.7
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
6.0
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
5.5
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
5.0
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
4.9
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
1.1
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
0.7
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
0.6
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
0.5
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
0.4
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
0.4
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
0.2
Show all
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off).
The Human Protein Atlas project is funded
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