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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 63.5
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 69.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 41.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 66
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 83
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 54.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 53.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 89.2
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 179.2
Min RPKM: 31.8
Std RPKM: 24.4
Median RPKM: 78.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
179.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
156.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
150.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
143.8
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
135.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
129.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
126.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
124.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
122.0
GTEX-R53T-0326-SM-48FEC
50-59 years, female
117.4
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
109.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
109.1
GTEX-X261-1726-SM-4PQYT
50-59 years, male
108.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
106.6
GTEX-S32W-1926-SM-4AD63
50-59 years, female
104.6
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
103.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
100.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
99.9
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
99.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
99.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
98.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
98.2
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
97.8
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
97.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
96.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
96.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
96.5
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
96.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
96.2
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
95.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
93.6
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
93.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
92.9
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
92.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
91.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
89.1
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
89.0
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
89.0
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
88.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
88.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
87.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
87.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
86.7
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
86.2
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
85.6
GTEX-RU72-1426-SM-46MUF
50-59 years, female
85.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
84.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
84.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
84.3
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
84.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
83.3
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
83.1
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
83.0
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
82.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
82.2
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
81.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
79.9
GTEX-QEL4-1226-SM-447A4
50-59 years, male
79.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
79.0
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
78.7
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
78.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
77.2
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
76.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
76.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
76.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
76.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
74.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
74.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
73.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
72.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
72.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
72.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
72.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
72.2
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
72.1
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
71.6
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
71.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
71.3
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
71.2
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
69.6
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
69.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
68.9
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
67.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
67.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
67.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
66.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
66.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
66.3
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
66.2
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
65.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
65.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
64.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
63.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
62.0
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
61.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
61.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
60.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
59.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
59.7
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
59.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
57.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
56.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
56.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
55.7
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
55.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
55.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
54.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
54.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
54.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
52.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
52.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
50.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
48.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
47.8
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
47.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
45.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
42.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
38.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
31.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
