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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 273.8
Min RPKM: 42.4
Std RPKM: 43.7
Median RPKM: 104.0
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
273.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
249.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
236.7
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
219.1
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
211.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
206.4
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
191.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
188.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
178.6
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
169.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
166.9
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
161.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
156.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
155.0
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
154.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
149.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
148.1
GTEX-11I78-2026-SM-5987C
50-59 years, female
147.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
147.3
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
144.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
139.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
135.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
131.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
131.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
123.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
123.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
121.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
120.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
120.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
119.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
117.8
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
117.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
115.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
115.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
114.2
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
111.6
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
111.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
110.7
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
109.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
108.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
108.3
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
107.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
107.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
107.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
106.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
105.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
105.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
104.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
103.4
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
99.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
99.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
99.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
99.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
98.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
97.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
96.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
95.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
95.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
94.0
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
93.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
91.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
90.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
90.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
88.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
88.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
88.2
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
87.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
87.7
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
87.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
86.3
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
86.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
85.0
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
82.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
82.0
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
81.9
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
81.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
80.7
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
79.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
78.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
77.5
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
76.4
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
75.8
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
75.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
73.8
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
73.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
73.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
71.5
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
69.1
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
68.8
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
66.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
65.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
65.0
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
61.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
57.7
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
46.5
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
42.4
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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