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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 115.8
Min RPKM: 24.1
Std RPKM: 17.8
Median RPKM: 54.5
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
115.8
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
100.5
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
85.9
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
81.3
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
79.8
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
77.5
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
77.3
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
76.5
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
74.8
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
73.4
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
73.0
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
71.9
GTEX-1445S-2926-SM-5O993
60-69 years, male
70.6
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
66.1
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
65.8
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
65.2
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
62.9
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
62.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
62.1
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
61.4
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
57.9
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
57.8
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
56.5
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
56.4
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
55.9
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
55.6
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
55.3
GTEX-11P82-0926-SM-5986X
20-29 years, male
55.1
GTEX-13O21-1926-SM-5MR39
50-59 years, male
54.5
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
54.3
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
52.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
52.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
51.4
GTEX-13113-1526-SM-5EGHV
60-69 years, female
49.8
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
49.1
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
48.3
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
48.1
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
48.0
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
47.8
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
46.6
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
46.3
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
45.3
GTEX-X261-2426-SM-4PQZU
50-59 years, male
44.3
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
43.9
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
42.8
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
42.5
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
39.6
GTEX-Y111-2626-SM-4TT24
50-59 years, male
39.1
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
39.1
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
39.0
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
36.0
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
30.9
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
30.0
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
29.8
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
29.3
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
27.8
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
24.1
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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