We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1475.5
Min RPKM: 383.7
Std RPKM: 179.4
Median RPKM: 685.0
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
1475.5
GTEX-1192X-2526-SM-59868
50-59 years, male
1420.5
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
1125.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
1073.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
1038.6
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
945.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
921.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
907.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
902.8
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
900.1
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
891.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
876.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
869.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
846.2
GTEX-117YX-0326-SM-5GICL
50-59 years, male
830.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
823.4
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
804.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
803.4
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
796.7
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
788.6
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
776.2
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
774.6
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
774.2
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
773.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
765.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
764.9
GTEX-13O61-1326-SM-5KM31
60-69 years, male
762.1
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
757.3
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
750.3
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
742.8
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
742.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
738.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
726.9
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
722.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
714.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
713.4
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
711.3
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
708.2
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
707.0
GTEX-13111-1426-SM-5DUW3
50-59 years, male
699.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
696.1
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
693.2
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
687.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
685.2
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
684.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
683.7
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
682.5
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
681.7
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
678.4
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
669.4
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
654.9
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
647.0
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
646.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
646.0
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
642.7
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
642.6
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
639.1
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
635.2
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
634.5
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
630.0
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
621.4
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
621.1
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
614.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
604.8
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
603.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
595.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
583.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
582.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
578.7
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
570.6
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
567.2
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
564.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
564.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
558.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
557.6
GTEX-ZTSS-0926-SM-59865
40-49 years, male
550.9
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
533.6
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
530.5
GTEX-111YS-1426-SM-5GID8
60-69 years, male
519.8
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
518.0
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
516.5
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
502.5
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
488.6
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
487.1
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
482.2
GTEX-1122O-1326-SM-5H11F
60-69 years, female
463.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
449.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
383.7
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.