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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 596.4
Min RPKM: 119.8
Std RPKM: 101.7
Median RPKM: 322.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
596.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
588.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
582.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
582.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
554.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
553.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
545.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
508.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
501.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
491.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
479.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
476.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
472.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
453.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
451.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
429.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
428.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
418.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
411.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
408.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
404.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
402.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
393.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
392.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
391.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
386.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
377.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
369.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
369.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
366.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
366.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
365.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
365.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
360.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
357.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
354.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
347.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
337.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
336.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
335.9
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
335.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
330.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
329.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
326.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
326.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
325.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
325.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
320.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
313.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
311.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
310.5
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
309.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
309.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
306.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
305.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
301.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
297.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
289.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
288.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
285.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
283.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
283.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
282.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
282.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
282.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
281.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
281.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
278.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
277.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
276.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
269.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
267.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
260.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
256.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
255.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
251.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
249.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
246.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
246.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
242.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
241.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
241.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
241.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
236.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
234.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
233.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
233.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
226.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
221.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
220.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
184.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
168.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
155.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
119.8
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.