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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1419.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 327.1
Min RPKM: 131.7
Std RPKM: 38.7
Median RPKM: 180.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
327.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
316.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
294.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
277.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
276.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
269.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
266.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
263.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
251.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
250.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
246.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
241.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
237.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
234.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
231.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
231.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
228.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
227.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
226.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
223.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
223.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
218.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
215.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
215.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
213.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
213.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
213.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
212.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
212.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
208.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
206.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
205.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
204.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
204.6
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
203.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
201.5
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
201.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
201.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
200.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
198.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
198.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
198.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
192.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
191.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
188.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
187.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
187.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
187.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
186.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
185.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
185.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
185.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
185.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
183.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
181.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
181.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
181.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
180.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
179.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
178.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
178.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
175.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
175.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
175.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
174.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
174.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
173.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
173.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
172.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
172.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
172.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
172.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
171.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
171.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
170.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
168.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
167.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
167.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
167.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
166.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
166.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
166.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
166.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
165.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
165.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
163.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
161.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
161.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
160.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
160.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
159.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
158.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
157.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
157.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
156.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
156.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
155.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
155.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
154.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
151.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
149.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
148.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
147.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
147.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
146.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
145.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
143.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
142.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
140.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
138.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
138.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
135.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
132.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
131.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 230.1
Samples: 108
Max RPKM: 539.0
Min RPKM: 126.9
Std RPKM: 67.3
Median RPKM: 215.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
539.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
497.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
436.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
397.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
374.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
351.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
322.9
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
312.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
310.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
309.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
300.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
300.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
299.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
294.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
289.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
289.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
289.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
286.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
282.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
276.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
271.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
270.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
270.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
267.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
265.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
264.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
264.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
263.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
255.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
254.2
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
253.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
253.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
245.7
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
239.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
238.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
237.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
237.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
236.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
236.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
236.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
234.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
229.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
227.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
225.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
224.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
224.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
223.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
223.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
221.9
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
221.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
220.1
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
219.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
216.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
216.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
214.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
212.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
211.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
209.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
206.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
205.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
204.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
202.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
201.6
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
200.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
200.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
200.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
198.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
197.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
196.3
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
194.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
194.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
194.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
193.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
192.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
191.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
189.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
187.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
187.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
187.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
187.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
183.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
183.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
181.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
181.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
181.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
180.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
179.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
179.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
178.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
178.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
178.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
177.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
176.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
175.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
173.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
172.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
172.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
170.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
169.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
168.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
166.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
164.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
155.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
154.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
145.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
144.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
143.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
126.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.