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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 5775.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 5277.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 6451.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2113.8
Min RPKM: 550.4
Std RPKM: 243.2
Median RPKM: 907.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2113.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1814.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
1695.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1635.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1606.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
1548.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1539.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
1536.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1525.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1490.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1481.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1457.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1422.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1406.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1388.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1382.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1370.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1354.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
1340.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1317.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1315.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
1274.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1262.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1257.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1240.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1238.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1234.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1226.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1213.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1204.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1192.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
1191.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1181.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1178.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1171.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1156.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1144.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1138.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1134.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1133.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
1121.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
1117.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1113.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1111.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1106.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
1096.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
1093.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1090.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1079.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1075.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1074.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
1069.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
1067.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
1063.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1057.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1054.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1053.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
1047.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1045.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1044.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1039.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1039.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
1038.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
1037.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1035.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1031.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
1029.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
1027.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
1026.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
1014.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1011.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
1009.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1007.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
1003.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1002.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
993.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
993.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
990.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
987.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
984.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
981.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
979.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
978.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
974.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
973.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
972.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
970.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
967.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
966.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
965.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
961.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
955.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
953.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
951.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
950.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
948.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
937.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
936.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
932.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
929.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
929.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
925.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
910.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
909.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
908.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
908.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
907.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
907.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
905.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
904.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
904.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
902.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
902.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
900.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
895.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
892.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
888.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
886.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
885.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
883.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
878.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
874.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
874.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
870.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
868.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
867.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
866.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
866.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
866.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
860.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
858.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
852.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
852.8
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
851.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
849.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
849.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
847.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
846.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
846.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
844.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
842.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
841.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
839.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
837.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
837.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
834.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
833.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
833.6
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
828.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
826.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
825.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
824.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
814.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
812.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
811.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
809.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
805.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
803.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
802.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
802.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
799.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
797.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
792.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
792.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
791.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
787.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
784.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
783.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
781.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
777.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
774.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
771.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
770.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
770.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
768.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
766.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
764.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
763.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
761.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
757.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
756.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
754.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
748.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
735.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
732.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
728.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
727.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
714.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
712.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
711.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
709.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
705.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
704.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
702.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
695.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
693.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
693.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
691.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
669.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
668.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
667.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
658.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
656.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
655.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
654.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
651.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
641.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
641.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
640.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
638.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
626.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
589.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
576.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
550.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.