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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 112.4
Min RPKM: 0.0
Std RPKM: 24.4
Median RPKM: 5.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
112.4
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
104.4
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
96.7
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
71.8
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
68.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
67.0
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
59.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
57.2
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
49.1
GTEX-13O61-1326-SM-5KM31
60-69 years, male
46.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
44.7
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
44.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
40.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
40.7
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
37.7
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
35.8
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
35.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
33.1
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
32.6
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
31.2
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
29.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
29.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
28.0
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
22.9
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
22.6
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
21.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
19.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
18.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
18.2
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
16.3
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
14.6
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
14.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
13.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
12.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
11.9
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
11.5
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
10.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
9.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
8.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
7.8
GTEX-13113-1226-SM-5EGHT
60-69 years, female
7.4
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
6.2
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
5.4
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
5.3
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
5.0
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
4.9
GTEX-13111-1426-SM-5DUW3
50-59 years, male
4.4
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
4.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
4.2
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
4.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
4.0
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
3.8
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
3.8
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
3.6
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
3.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
3.4
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
3.3
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
3.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
3.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
2.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
2.3
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
2.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
1.7
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
1.6
GTEX-1192X-2526-SM-59868
50-59 years, male
1.3
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
1.3
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
1.2
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
1.2
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
1.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
1.0
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
0.8
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
0.8
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
0.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
0.8
GTEX-ZTSS-0926-SM-59865
40-49 years, male
0.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
0.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
0.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
0.4
GTEX-1122O-1326-SM-5H11F
60-69 years, female
0.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
0.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
0.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
0.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
0.2
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
0.2
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
0.2
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
0.2
GTEX-117YX-0326-SM-5GICL
50-59 years, male
0.0
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
0.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
