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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 2147.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 765.1
Min RPKM: 65.0
Std RPKM: 148.4
Median RPKM: 371.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
765.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
669.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
653.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
627.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
617.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
597.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
589.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
585.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
585.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
578.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
572.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
559.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
555.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
552.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
552.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
547.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
545.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
541.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
541.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
526.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
518.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
518.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
517.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
514.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
513.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
506.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
496.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
493.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
491.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
488.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
488.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
486.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
486.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
458.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
457.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
450.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
449.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
447.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
445.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
436.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
432.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
420.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
419.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
418.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
417.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
412.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
412.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
399.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
396.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
395.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
391.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
388.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
387.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
386.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
384.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
377.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
372.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
369.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
368.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
366.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
354.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
343.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
339.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
337.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
337.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
337.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
337.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
337.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
335.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
333.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
329.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
325.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
323.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
323.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
320.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
316.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
295.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
294.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
286.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
283.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
280.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
274.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
270.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
269.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
266.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
242.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
240.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
233.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
228.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
226.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
222.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
215.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
214.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
213.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
207.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
204.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
200.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
199.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
198.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
184.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
180.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
178.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
177.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
175.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
169.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
160.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
155.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
134.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
134.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
122.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
117.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
109.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
95.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
65.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 765.2
Samples: 108
Max RPKM: 1421.2
Min RPKM: 70.3
Std RPKM: 335.1
Median RPKM: 830.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
1421.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
1410.9
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
1343.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
1337.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
1293.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
1284.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
1216.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
1198.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
1185.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
1173.5
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
1159.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
1153.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
1149.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
1120.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
1091.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
1089.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
1086.6
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
1076.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
1075.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
1063.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
1062.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
1059.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
1054.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
1042.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
1035.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
1031.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
1024.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
1015.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
1007.1
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
1005.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
1000.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
971.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
962.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
959.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
947.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
945.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
945.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
944.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
938.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
929.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
923.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
920.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
919.7
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
907.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
904.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
901.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
880.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
867.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
861.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
860.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
854.1
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
853.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
836.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
833.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
827.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
822.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
814.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
790.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
763.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
759.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
752.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
749.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
746.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
745.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
725.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
716.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
709.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
709.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
703.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
698.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
689.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
684.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
656.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
652.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
645.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
583.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
576.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
553.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
544.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
528.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
481.5
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
479.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
476.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
473.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
469.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
430.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
428.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
383.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
383.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
380.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
371.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
367.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
346.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
322.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
318.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
275.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
239.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
219.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
210.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
204.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
202.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
187.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
166.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
153.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
149.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
85.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
85.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
70.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.