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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 629.2
Min RPKM: 10.2
Std RPKM: 142.3
Median RPKM: 207.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
629.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
620.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
465.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
456.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
448.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
438.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
436.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
412.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
408.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
407.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
405.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
402.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
401.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
401.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
400.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
396.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
389.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
376.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
375.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
370.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
368.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
363.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
358.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
357.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
354.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
353.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
352.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
346.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
343.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
338.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
335.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
334.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
331.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
319.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
318.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
308.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
308.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
307.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
304.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
300.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
296.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
285.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
284.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
282.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
269.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
268.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
267.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
267.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
261.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
257.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
253.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
252.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
244.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
243.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
241.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
240.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
232.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
212.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
207.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
201.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
194.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
187.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
185.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
176.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
168.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
165.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
164.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
164.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
162.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
161.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
147.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
145.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
145.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
140.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
137.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
131.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
129.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
129.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
128.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
128.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
127.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
124.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
124.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
120.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
103.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
101.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
101.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
87.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
85.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
81.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
81.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
81.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
79.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
78.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
78.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
67.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
65.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
63.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
60.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
59.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
59.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
48.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
47.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
42.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
41.3
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
38.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
38.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
34.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
29.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
21.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
21.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
20.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
17.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
15.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
13.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
12.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
10.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.