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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 198.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 156.5
Min RPKM: 27.7
Std RPKM: 26.9
Median RPKM: 91.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
156.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
138.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
135.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
129.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
129.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
127.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
127.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
126.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
125.7
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
124.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
121.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
120.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
120.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
118.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
118.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
117.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
117.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
116.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
116.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
115.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
114.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
112.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
112.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
112.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
111.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
111.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
110.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
110.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
109.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
109.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
108.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
107.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
106.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
105.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
105.8
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
105.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
104.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
104.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
102.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
101.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
100.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
99.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
98.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
97.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
97.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
96.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
96.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
96.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
96.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
96.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
95.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
95.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
94.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
94.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
92.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
92.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
92.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
91.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
88.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
88.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
88.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
87.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
86.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
86.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
85.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
85.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
84.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
84.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
84.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
84.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
84.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
82.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
82.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
82.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
82.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
81.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
81.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
81.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
80.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
80.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
78.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
76.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
76.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
76.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
75.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
72.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
70.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
69.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
65.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
64.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
64.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
64.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
62.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
61.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
58.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
57.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
55.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
54.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
54.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
54.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
52.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
50.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
50.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
46.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
45.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
45.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
45.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
42.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
39.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
38.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
35.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
28.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
28.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
27.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 85.7
Samples: 108
Max RPKM: 149.7
Min RPKM: 25.9
Std RPKM: 27.6
Median RPKM: 90.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
149.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
142.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
135.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
133.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
130.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
128.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
126.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
120.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
120.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
120.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
116.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
115.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
113.7
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
113.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
112.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
112.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
112.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
111.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
111.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
111.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
110.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
110.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
107.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
107.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
106.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
106.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
106.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
105.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
105.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
105.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
105.1
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
102.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
102.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
101.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
101.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
101.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
100.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
99.8
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
99.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
99.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
96.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
96.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
96.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
95.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
94.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
93.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
92.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
92.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
91.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
91.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
91.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
90.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
90.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
90.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
90.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
89.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
89.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
87.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
87.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
85.7
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
85.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
84.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
83.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
83.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
81.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
80.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
80.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
80.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
79.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
77.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
77.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
76.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
75.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
75.6
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
75.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
74.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
74.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
72.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
72.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
70.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
69.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
69.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
67.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
67.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
60.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
59.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
59.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
56.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
54.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
54.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
52.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
51.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
51.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
47.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
46.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
46.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
44.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
42.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
40.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
39.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
37.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
35.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
35.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
34.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
31.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
31.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
28.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
25.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.